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Agentic AI framework for End-to-End Medical Data Inference

Created by
  • Haebom

Author

Soorya Ram Shimgekar, Shayan Vassef, Abhay Goyal, Navin Kumar, Koustuv Saha

Outline

This paper presents an agent AI framework based on a modular task-specific agent system to address the challenges of building and deploying machine learning solutions in healthcare (fragmented preprocessing workflows, model compatibility issues, and strict data privacy constraints). The framework automates the entire clinical data pipeline from data collection to inference, automatically performing feature selection, model selection, and preprocessing recommendations without manual intervention. The system is evaluated using public datasets from gerontology, palliative care, and colonoscopy images, and examples are presented for structured data (anxiety data) and unstructured data (colonoscopy polyp data). It goes through steps such as data type detection, data anonymization, feature extraction, model-data feature matching, preprocessing recommendations and implementation, and model inference, and generates interpretable outputs using tools such as SHAP, LIME, and DETR attention maps. This reduces the need for repetitive expert intervention and provides a scalable and cost-effective path for operationalizing AI in clinical settings.

Takeaways, Limitations

Takeaways:
Providing an efficient framework for automating machine learning pipelines in healthcare
Cost and time savings through minimizing manual intervention by experts
Capable of processing various types of clinical data (structured/unstructured)
Improve model confidence by providing interpretable results
Increasing scalability and efficiency of healthcare AI operations
Limitations:
Further validation of the generalization performance of the presented agents and their applicability to various clinical datasets is needed.
Complexity and maintenance difficulties of the framework
Potential bias and fairness issues with certain medical data
Need to review compliance with strict regulations on data privacy
Further research is needed on implementation and application in real clinical settings.
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