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CRABS: A syntactic-semantic pincer strategy for bounding LLM interpretation of Python notebooks

Created by
  • Haebom

Author

Meng Li, Timothy M. McPhillips, Dingmin Wang, Shin-Rong Tsai, and Bertram Lud ascher.

Outline

This paper highlights the importance of recognizing the information flow and computations that compose data science and machine learning Python notebooks for evaluating, reusing, and adapting them to new tasks. Re-executing and examining notebooks is often impractical due to the difficulty of resolving data and software dependencies. While large-scale language models (LLMs) pretrained on large codebases have been shown to be effective in understanding code without execution, we observed that some realistic notebooks fail to be understood due to hallucinations and long contexts. To address these issues, we propose a notebook understanding task that generates a notebook's information flow graph and the corresponding cell execution dependency graph. We also demonstrate the effectiveness of a "pincer" strategy that utilizes limited syntactic analysis to facilitate complete notebook comprehension using LLMs. The Capture and Resolve Assisted Bounding Strategy (CRABS) uses shallow parsing and abstract syntax tree (AST) analysis to capture the correct interpretation of a notebook between lower and upper bound estimates of the set of inter-cell I/Os (information flow to and from cells via variables). It then resolves any remaining ambiguities using the LLM, using cell-wise zero-shot learning, to identify the actual data inputs and outputs for each cell. We evaluate and demonstrate the effectiveness of our approach using an annotated dataset consisting of 50 representative, high-vote Kaggle notebooks representing 3,454 actual cell inputs and outputs. The LLM analyzes the syntactic structure of these notebooks, correctly resolving 1,397 (98%) of the remaining 1,425 ambiguities. Across the 50 notebooks, CRABS achieves an average F1 score of 98% for identifying inter-cell information flow and an average F1 score of 99% for identifying excessive cell execution dependencies.

Takeaways, Limitations

Takeaways:
We demonstrate that the CRABS strategy, combining limited parsing and LLM, can effectively analyze the information flow and execution dependencies of Python notebooks.
We present a practical method to perform notebook understanding tasks with high accuracy (98-99% F1 score).
It presents new possibilities for reuse and adaptation of data science and machine learning notebooks.
Limitations:
Currently, only evaluation results for 50 Kaggle notebook datasets are presented, requiring further research on generalizability.
Additional generalization performance evaluations for various types of Python notebooks and complex codes are needed.
LLM's hallucination problem may not be completely resolved, and a more robust solution may be needed.
A more detailed analysis of the computational cost and efficiency of CRABS is needed.
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