This paper points out a serious Limitations limitation of the BFO 2020 ontology: it does not support the capabilities, tendencies, and roles of commonly dependent persistent entities, such as software and datasets. This limitation hinders the proper representation of the capabilities of computer models and the various roles of datasets during model execution. This paper discusses the inability of BFO 2020 to represent the realizable entities of commonly dependent persistent entities and proposes two approaches to address this issue: (a) the use of defined classes and (b) a proposal to modify BFO to support the capabilities, tendencies, and roles of commonly dependent persistent entities. The latter approach also addresses limitations of BFO 2020, particularly regarding the roles and tendencies of immaterial entities, such as boundaries and locations.