This paper presents a system that utilizes artificial intelligence (AI), specifically Bayesian optimization, for the transport process of radioactive heavy ion beams. Radioactive heavy ion beams are used to study rare and unstable atomic nuclei, but the transport process relies on time-consuming expert-driven tuning methods that manually optimize hundreds of parameters. This study applies an AI-based methodology to a real-world scenario and demonstrates its advantages over conventional tuning methods. This AI-assisted approach can be extended to other radioactive beam facilities around the world to improve operational efficiency and enhance scientific output.