This paper presents a novel hybrid deep learning approach for hypersonic missile trajectory prediction. By integrating convolutional neural networks (CNNs), long short-term memory (LSTM) networks, and gated recurrent units (GRUs), we propose a method to predict the complex trajectories of hypersonic missiles with high accuracy. This study demonstrates the potential of advanced machine learning techniques in improving the prediction capability of defense systems. This can make important contributions to the development of defense industry for national security and safety.